Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rita1Q9D1H0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rita1Q9D1H0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rita1Q9D1H0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rita1Q9D1H0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rita1Q9D1H0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Rita1Q9D1H0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Rita1Q9D1H0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rita1Q9D1H0 Haglr-201ENSMUST00000100000 2085 ntBASIC14.94□□□□□ -0.02
Rita1Q9D1H0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rita1Q9D1H0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rita1Q9D1H0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Gm12644-201ENSMUST00000119935 606 ntBASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Gm27459-201ENSMUST00000184860 107 ntBASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rita1Q9D1H0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rita1Q9D1H0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.91□□□□□ -0.02
Rita1Q9D1H0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Gm43347-201ENSMUST00000200226 580 ntBASIC14.91□□□□□ -0.02
Rita1Q9D1H0 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.91□□□□□ -0.02
Rita1Q9D1H0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Gm7461-201ENSMUST00000058918 827 ntBASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rita1Q9D1H0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rita1Q9D1H0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rita1Q9D1H0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms