Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Chaf1bQ9D0N7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1bQ9D0N7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1bQ9D0N7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1bQ9D0N7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1bQ9D0N7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chaf1bQ9D0N7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.34■□□□□ 0.05
Chaf1bQ9D0N7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chaf1bQ9D0N7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chaf1bQ9D0N7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Chaf1bQ9D0N7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chaf1bQ9D0N7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chaf1bQ9D0N7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chaf1bQ9D0N7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chaf1bQ9D0N7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Chaf1bQ9D0N7 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chaf1bQ9D0N7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chaf1bQ9D0N7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chaf1bQ9D0N7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Gm12085-201ENSMUST00000119263 940 ntBASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Gm18958-201ENSMUST00000174258 762 ntBASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chaf1bQ9D0N7 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms