Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mms19Q9D071 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mms19Q9D071 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mms19Q9D071 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mms19Q9D071 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mms19Q9D071 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mms19Q9D071 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mms19Q9D071 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mms19Q9D071 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mms19Q9D071 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Mms19Q9D071 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.36■□□□□ 0.37
Mms19Q9D071 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Mms19Q9D071 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Mms19Q9D071 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.36■□□□□ 0.37
Mms19Q9D071 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Mms19Q9D071 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Mms19Q9D071 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.36■□□□□ 0.37
Mms19Q9D071 Mir3081-201ENSMUST00000175305 84 ntBASIC17.36■□□□□ 0.37
Mms19Q9D071 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Mms19Q9D071 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.36■□□□□ 0.37
Mms19Q9D071 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mms19Q9D071 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.36■□□□□ 0.37
Mms19Q9D071 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mms19Q9D071 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mms19Q9D071 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Mms19Q9D071 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Mms19Q9D071 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Mms19Q9D071 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Mms19Q9D071 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mms19Q9D071 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mms19Q9D071 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mms19Q9D071 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mms19Q9D071 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mms19Q9D071 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.35■□□□□ 0.37
Mms19Q9D071 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mms19Q9D071 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mms19Q9D071 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mms19Q9D071 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mms19Q9D071 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Mms19Q9D071 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mms19Q9D071 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mms19Q9D071 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mms19Q9D071 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mms19Q9D071 Gm13216-201ENSMUST00000117145 591 ntBASIC17.34■□□□□ 0.37
Mms19Q9D071 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.34■□□□□ 0.37
Mms19Q9D071 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mms19Q9D071 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mms19Q9D071 Gm10052-201ENSMUST00000168019 960 ntBASIC17.34■□□□□ 0.37
Mms19Q9D071 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.34■□□□□ 0.37
Mms19Q9D071 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.34■□□□□ 0.37
Mms19Q9D071 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.34■□□□□ 0.37
Mms19Q9D071 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mms19Q9D071 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mms19Q9D071 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mms19Q9D071 Gm18669-201ENSMUST00000216049 778 ntBASIC17.34■□□□□ 0.37
Mms19Q9D071 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.34■□□□□ 0.37
Mms19Q9D071 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mms19Q9D071 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mms19Q9D071 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mms19Q9D071 Gm7729-201ENSMUST00000050143 801 ntBASIC17.34■□□□□ 0.37
Mms19Q9D071 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mms19Q9D071 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Mms19Q9D071 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mms19Q9D071 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mms19Q9D071 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mms19Q9D071 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mms19Q9D071 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.34■□□□□ 0.37
Mms19Q9D071 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mms19Q9D071 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mms19Q9D071 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mms19Q9D071 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Mms19Q9D071 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mms19Q9D071 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mms19Q9D071 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.33■□□□□ 0.37
Mms19Q9D071 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Mms19Q9D071 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Mms19Q9D071 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mms19Q9D071 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mms19Q9D071 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Mms19Q9D071 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mms19Q9D071 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mms19Q9D071 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.33■□□□□ 0.36
Mms19Q9D071 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mms19Q9D071 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms