Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim13Q9CYB0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trim13Q9CYB0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.06■□□□□ 0
Trim13Q9CYB0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.06■□□□□ 0
Trim13Q9CYB0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trim13Q9CYB0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim13Q9CYB0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim13Q9CYB0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim13Q9CYB0 Gm27275-201ENSMUST00000184318 272 ntBASIC15.06■□□□□ 0
Trim13Q9CYB0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim13Q9CYB0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.06■□□□□ 0
Trim13Q9CYB0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.06■□□□□ 0
Trim13Q9CYB0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim13Q9CYB0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trim13Q9CYB0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim13Q9CYB0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim13Q9CYB0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim13Q9CYB0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Trim13Q9CYB0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim13Q9CYB0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim13Q9CYB0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trim13Q9CYB0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trim13Q9CYB0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim13Q9CYB0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim13Q9CYB0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim13Q9CYB0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim13Q9CYB0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim13Q9CYB0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trim13Q9CYB0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim13Q9CYB0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim13Q9CYB0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim13Q9CYB0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Trim13Q9CYB0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.05■□□□□ -0
Trim13Q9CYB0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim13Q9CYB0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim13Q9CYB0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim13Q9CYB0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim13Q9CYB0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim13Q9CYB0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim13Q9CYB0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Trim13Q9CYB0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim13Q9CYB0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim13Q9CYB0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.05■□□□□ -0
Trim13Q9CYB0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim13Q9CYB0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.04■□□□□ -0
Trim13Q9CYB0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.04■□□□□ -0
Trim13Q9CYB0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trim13Q9CYB0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.04■□□□□ -0
Trim13Q9CYB0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Gm27011-201ENSMUST00000182352 972 ntBASIC15.04■□□□□ -0
Trim13Q9CYB0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Gm43183-201ENSMUST00000200632 547 ntBASIC15.04■□□□□ -0
Trim13Q9CYB0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.04■□□□□ -0
Trim13Q9CYB0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.04■□□□□ -0
Trim13Q9CYB0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim13Q9CYB0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Trim13Q9CYB0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.03■□□□□ -0
Trim13Q9CYB0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trim13Q9CYB0 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.03■□□□□ -0
Trim13Q9CYB0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim13Q9CYB0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.03■□□□□ -0
Trim13Q9CYB0 Gm18666-201ENSMUST00000190039 958 ntBASIC15.03■□□□□ -0
Trim13Q9CYB0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.03■□□□□ -0
Trim13Q9CYB0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Trim13Q9CYB0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim13Q9CYB0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms