Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nip7Q9CXK8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nip7Q9CXK8 Gm14822-201ENSMUST00000122247 291 ntBASIC20.18■□□□□ 0.82
Nip7Q9CXK8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.18■□□□□ 0.82
Nip7Q9CXK8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.18■□□□□ 0.82
Nip7Q9CXK8 Gm24513-201ENSMUST00000174964 138 ntBASIC20.18■□□□□ 0.82
Nip7Q9CXK8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nip7Q9CXK8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.18■□□□□ 0.82
Nip7Q9CXK8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nip7Q9CXK8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nip7Q9CXK8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.18■□□□□ 0.82
Nip7Q9CXK8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nip7Q9CXK8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Gm27646-201ENSMUST00000183989 110 ntBASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Gm45683-201ENSMUST00000210825 1247 ntBASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nip7Q9CXK8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nip7Q9CXK8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nip7Q9CXK8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nip7Q9CXK8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Nip7Q9CXK8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.15■□□□□ 0.82
Nip7Q9CXK8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nip7Q9CXK8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nip7Q9CXK8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Nip7Q9CXK8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nip7Q9CXK8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nip7Q9CXK8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nip7Q9CXK8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Nip7Q9CXK8 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.15■□□□□ 0.82
Nip7Q9CXK8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nip7Q9CXK8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nip7Q9CXK8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nip7Q9CXK8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nip7Q9CXK8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nip7Q9CXK8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nip7Q9CXK8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nip7Q9CXK8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nip7Q9CXK8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Nip7Q9CXK8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.14■□□□□ 0.81
Nip7Q9CXK8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC20.14■□□□□ 0.81
Nip7Q9CXK8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nip7Q9CXK8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nip7Q9CXK8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nip7Q9CXK8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nip7Q9CXK8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nip7Q9CXK8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nip7Q9CXK8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nip7Q9CXK8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Nip7Q9CXK8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nip7Q9CXK8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nip7Q9CXK8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nip7Q9CXK8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC20.13■□□□□ 0.81
Nip7Q9CXK8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Nip7Q9CXK8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nip7Q9CXK8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC20.13■□□□□ 0.81
Nip7Q9CXK8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nip7Q9CXK8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nip7Q9CXK8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nip7Q9CXK8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nip7Q9CXK8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nip7Q9CXK8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Nip7Q9CXK8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms