Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.12■□□□□ 0.65
Smc3Q9CW03 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Gm2274-201ENSMUST00000184539 609 ntBASIC19.12■□□□□ 0.65
Smc3Q9CW03 Gm30025-201ENSMUST00000218555 728 ntBASIC19.12■□□□□ 0.65
Smc3Q9CW03 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc3Q9CW03 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc3Q9CW03 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc3Q9CW03 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc3Q9CW03 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc3Q9CW03 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc3Q9CW03 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smc3Q9CW03 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc3Q9CW03 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc3Q9CW03 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.11■□□□□ 0.65
Smc3Q9CW03 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc3Q9CW03 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.11■□□□□ 0.65
Smc3Q9CW03 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.11■□□□□ 0.65
Smc3Q9CW03 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smc3Q9CW03 Gm18421-201ENSMUST00000204122 625 ntBASIC19.11■□□□□ 0.65
Smc3Q9CW03 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc3Q9CW03 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc3Q9CW03 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc3Q9CW03 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Gm16061-201ENSMUST00000122167 857 ntBASIC19.1■□□□□ 0.65
Smc3Q9CW03 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc3Q9CW03 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.1■□□□□ 0.65
Smc3Q9CW03 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smc3Q9CW03 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smc3Q9CW03 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.1■□□□□ 0.65
Smc3Q9CW03 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.09■□□□□ 0.65
Smc3Q9CW03 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Gm13474-201ENSMUST00000122466 815 ntBASIC19.09■□□□□ 0.65
Smc3Q9CW03 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
Smc3Q9CW03 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smc3Q9CW03 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smc3Q9CW03 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smc3Q9CW03 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Smc3Q9CW03 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.08■□□□□ 0.64
Smc3Q9CW03 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.08■□□□□ 0.64
Smc3Q9CW03 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Smc3Q9CW03 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.08■□□□□ 0.64
Smc3Q9CW03 Gm7213-201ENSMUST00000215977 950 ntBASIC19.08■□□□□ 0.64
Smc3Q9CW03 Gm10566-201ENSMUST00000086739 996 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms