Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrc40Q9CRC8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrc40Q9CRC8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrc40Q9CRC8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrc40Q9CRC8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Gm37722-201ENSMUST00000193757 208 ntBASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrrc40Q9CRC8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Lrrc40Q9CRC8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Lrrc40Q9CRC8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Gm11355-201ENSMUST00000121120 306 ntBASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrrc40Q9CRC8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrrc40Q9CRC8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Dancr-204ENSMUST00000132389 2347 ntBASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms