Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CR55 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CR55 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.13■□□□□ 0.01
Q9CR55 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.13■□□□□ 0.01
Q9CR55 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Q9CR55 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CR55 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CR55 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Q9CR55 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CR55 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CR55 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q9CR55 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Q9CR55 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CR55 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CR55 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CR55 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CR55 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CR55 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CR55 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CR55 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Q9CR55 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CR55 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.12■□□□□ 0.01
Q9CR55 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CR55 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CR55 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CR55 Gm13146-201ENSMUST00000118508 780 ntBASIC15.12■□□□□ 0.01
Q9CR55 Gm12441-201ENSMUST00000121806 588 ntBASIC15.12■□□□□ 0.01
Q9CR55 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.12■□□□□ 0.01
Q9CR55 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CR55 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CR55 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CR55 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Q9CR55 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CR55 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Q9CR55 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.12■□□□□ 0.01
Q9CR55 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Q9CR55 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CR55 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CR55 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CR55 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CR55 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CR55 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Q9CR55 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CR55 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Q9CR55 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.11■□□□□ 0.01
Q9CR55 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.11■□□□□ 0.01
Q9CR55 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CR55 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.11■□□□□ 0.01
Q9CR55 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.11■□□□□ 0.01
Q9CR55 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
Q9CR55 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.11■□□□□ 0.01
Q9CR55 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CR55 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CR55 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Q9CR55 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CR55 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CR55 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CR55 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CR55 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CR55 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CR55 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.1■□□□□ 0.01
Q9CR55 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CR55 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CR55 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CR55 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Q9CR55 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Q9CR55 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CR55 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CR55 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CR55 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CR55 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CR55 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CR55 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CR55 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CR55 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CR55 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Q9CR55 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
Q9CR55 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.09■□□□□ 0.01
Q9CR55 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Q9CR55 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.09■□□□□ 0.01
Q9CR55 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Q9CR55 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CR55 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms