Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retreg3Q9CQV4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Retreg3Q9CQV4 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC16.34■□□□□ 0.21
Retreg3Q9CQV4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retreg3Q9CQV4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retreg3Q9CQV4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Retreg3Q9CQV4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retreg3Q9CQV4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retreg3Q9CQV4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Retreg3Q9CQV4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retreg3Q9CQV4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retreg3Q9CQV4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retreg3Q9CQV4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retreg3Q9CQV4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retreg3Q9CQV4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Retreg3Q9CQV4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retreg3Q9CQV4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retreg3Q9CQV4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retreg3Q9CQV4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retreg3Q9CQV4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retreg3Q9CQV4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retreg3Q9CQV4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retreg3Q9CQV4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Retreg3Q9CQV4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Retreg3Q9CQV4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Retreg3Q9CQV4 Olfr129-201ENSMUST00000122318 993 ntBASIC16.33■□□□□ 0.2
Retreg3Q9CQV4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.33■□□□□ 0.2
Retreg3Q9CQV4 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.33■□□□□ 0.2
Retreg3Q9CQV4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.33■□□□□ 0.2
Retreg3Q9CQV4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Retreg3Q9CQV4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retreg3Q9CQV4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Retreg3Q9CQV4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retreg3Q9CQV4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retreg3Q9CQV4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retreg3Q9CQV4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retreg3Q9CQV4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Gm10052-201ENSMUST00000168019 960 ntBASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Gm44430-201ENSMUST00000203376 995 ntBASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Gm45328-201ENSMUST00000210942 917 ntBASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Gm7729-201ENSMUST00000050143 801 ntBASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retreg3Q9CQV4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Dancr-204ENSMUST00000132389 2347 ntBASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms