Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cotl1Q9CQI6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cotl1Q9CQI6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cotl1Q9CQI6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.82□□□□□ -0.36
Cotl1Q9CQI6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.82□□□□□ -0.36
Cotl1Q9CQI6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Cotl1Q9CQI6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cotl1Q9CQI6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cotl1Q9CQI6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cotl1Q9CQI6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cotl1Q9CQI6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cotl1Q9CQI6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.82□□□□□ -0.36
Cotl1Q9CQI6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cotl1Q9CQI6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Zfp783-201ENSMUST00000095946 670 ntBASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cotl1Q9CQI6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cotl1Q9CQI6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Gm27405-201ENSMUST00000184201 112 ntBASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Gm26524-201ENSMUST00000192339 390 ntBASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Rab3c-203ENSMUST00000224180 967 ntBASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cotl1Q9CQI6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms