Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Mir5130-201ENSMUST00000175160 84 ntBASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb1Q9CQ70 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Gm26039-201ENSMUST00000158152 144 ntBASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Gm10566-201ENSMUST00000086739 996 ntBASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb1Q9CQ70 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Gm45058-201ENSMUST00000205810 766 ntBASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb1Q9CQ70 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms