Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf8Q99PV0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf8Q99PV0 Grk6-207ENSMUST00000225925 2769 ntBASIC13.27□□□□□ -0.28
Prpf8Q99PV0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf8Q99PV0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf8Q99PV0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf8Q99PV0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf8Q99PV0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Prpf8Q99PV0 Gm1401-201ENSMUST00000122048 772 ntBASIC13.27□□□□□ -0.28
Prpf8Q99PV0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.27□□□□□ -0.28
Prpf8Q99PV0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf8Q99PV0 Gm6296-201ENSMUST00000222599 943 ntBASIC13.27□□□□□ -0.28
Prpf8Q99PV0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf8Q99PV0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf8Q99PV0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf8Q99PV0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf8Q99PV0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Prpf8Q99PV0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf8Q99PV0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf8Q99PV0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf8Q99PV0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Prpf8Q99PV0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf8Q99PV0 Gm15467-201ENSMUST00000120582 445 ntBASIC13.27□□□□□ -0.29
Prpf8Q99PV0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Prpf8Q99PV0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf8Q99PV0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf8Q99PV0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Psmb5-202ENSMUST00000227257 622 ntBASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.26□□□□□ -0.29
Prpf8Q99PV0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Gm6550-201ENSMUST00000187574 993 ntBASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Gm7506-201ENSMUST00000207758 815 ntBASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Auts2-212ENSMUST00000178555 309 ntBASIC13.25□□□□□ -0.29
Prpf8Q99PV0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf8Q99PV0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms