Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scrt1Q99M85 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scrt1Q99M85 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scrt1Q99M85 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Scrt1Q99M85 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scrt1Q99M85 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scrt1Q99M85 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scrt1Q99M85 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scrt1Q99M85 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scrt1Q99M85 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.21□□□□□ -0.13
Scrt1Q99M85 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scrt1Q99M85 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.21□□□□□ -0.13
Scrt1Q99M85 Gm10060-201ENSMUST00000212002 111 ntBASIC14.21□□□□□ -0.13
Scrt1Q99M85 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scrt1Q99M85 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scrt1Q99M85 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scrt1Q99M85 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scrt1Q99M85 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Scrt1Q99M85 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scrt1Q99M85 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scrt1Q99M85 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Scrt1Q99M85 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scrt1Q99M85 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scrt1Q99M85 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Scrt1Q99M85 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.21□□□□□ -0.14
Scrt1Q99M85 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.21□□□□□ -0.14
Scrt1Q99M85 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Scrt1Q99M85 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scrt1Q99M85 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.19□□□□□ -0.14
Scrt1Q99M85 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.19□□□□□ -0.14
Scrt1Q99M85 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scrt1Q99M85 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scrt1Q99M85 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scrt1Q99M85 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scrt1Q99M85 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms