Protein–RNA interactions for Protein: Q920N1

Odf3, Outer dense fiber protein 3, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf3Q920N1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Odf3Q920N1 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.23□□□□□ -0.45
Odf3Q920N1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Odf3Q920N1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Odf3Q920N1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Odf3Q920N1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Odf3Q920N1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Odf3Q920N1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.23□□□□□ -0.45
Odf3Q920N1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Odf3Q920N1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Odf3Q920N1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Odf3Q920N1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Odf3Q920N1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Mir5130-201ENSMUST00000175160 84 ntBASIC12.22□□□□□ -0.45
Odf3Q920N1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Gm36967-201ENSMUST00000193814 266 ntBASIC12.22□□□□□ -0.45
Odf3Q920N1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.22□□□□□ -0.45
Odf3Q920N1 Gm18959-201ENSMUST00000208954 655 ntBASIC12.22□□□□□ -0.45
Odf3Q920N1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.22□□□□□ -0.45
Odf3Q920N1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.22□□□□□ -0.45
Odf3Q920N1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.22□□□□□ -0.45
Odf3Q920N1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Odf3Q920N1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Odf3Q920N1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Odf3Q920N1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Odf3Q920N1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Odf3Q920N1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Odf3Q920N1 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.21□□□□□ -0.45
Odf3Q920N1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Odf3Q920N1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Odf3Q920N1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Odf3Q920N1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Odf3Q920N1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Odf3Q920N1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Odf3Q920N1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Odf3Q920N1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Odf3Q920N1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Odf3Q920N1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Odf3Q920N1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Odf3Q920N1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Odf3Q920N1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Odf3Q920N1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.21□□□□□ -0.45
Odf3Q920N1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Odf3Q920N1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.21□□□□□ -0.45
Odf3Q920N1 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.21□□□□□ -0.45
Odf3Q920N1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Odf3Q920N1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Odf3Q920N1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Odf3Q920N1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.21□□□□□ -0.45
Odf3Q920N1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Odf3Q920N1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Odf3Q920N1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Odf3Q920N1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Odf3Q920N1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Odf3Q920N1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.21□□□□□ -0.46
Odf3Q920N1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Odf3Q920N1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Odf3Q920N1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Odf3Q920N1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Odf3Q920N1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Odf3Q920N1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Odf3Q920N1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Odf3Q920N1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Odf3Q920N1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Odf3Q920N1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Odf3Q920N1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.2□□□□□ -0.46
Odf3Q920N1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Odf3Q920N1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Odf3Q920N1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Odf3Q920N1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Odf3Q920N1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms