Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm5587-201ENSMUST00000206270 674 ntBASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.91■□□□□ 0.3
Pcdhb1Q91Y08 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb1Q91Y08 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdhb1Q91Y08 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Pcdhb1Q91Y08 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdhb1Q91Y08 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdhb1Q91Y08 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdhb1Q91Y08 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb1Q91Y08 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb1Q91Y08 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Pcdhb1Q91Y08 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Pcdhb1Q91Y08 Gm10052-201ENSMUST00000168019 960 ntBASIC16.89■□□□□ 0.29
Pcdhb1Q91Y08 Gm44430-201ENSMUST00000203376 995 ntBASIC16.89■□□□□ 0.29
Pcdhb1Q91Y08 Gm7729-201ENSMUST00000050143 801 ntBASIC16.89■□□□□ 0.29
Pcdhb1Q91Y08 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb1Q91Y08 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb1Q91Y08 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb1Q91Y08 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb1Q91Y08 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb1Q91Y08 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb1Q91Y08 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb1Q91Y08 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Pcdhb1Q91Y08 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms