Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Actl10-202ENSMUST00000226583 1501 ntBASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb4Q91XZ6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Gm16061-201ENSMUST00000122167 857 ntBASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Gm13474-201ENSMUST00000122466 815 ntBASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb4Q91XZ6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Gm13559-201ENSMUST00000120476 863 ntBASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb4Q91XZ6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb4Q91XZ6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb4Q91XZ6 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms