Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhga11Q91XY8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga11Q91XY8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga11Q91XY8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhga11Q91XY8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga11Q91XY8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga11Q91XY8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga11Q91XY8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga11Q91XY8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhga11Q91XY8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga11Q91XY8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Pcdhga11Q91XY8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga11Q91XY8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.71■□□□□ 0.11
Pcdhga11Q91XY8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga11Q91XY8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga11Q91XY8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Pcdhga11Q91XY8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Pcdhga11Q91XY8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhga11Q91XY8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhga11Q91XY8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhga11Q91XY8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga11Q91XY8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Gm44450-201ENSMUST00000199528 114 ntBASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Gm7213-201ENSMUST00000215977 950 ntBASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga11Q91XY8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Gm18959-201ENSMUST00000208954 655 ntBASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga11Q91XY8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga11Q91XY8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga11Q91XY8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga11Q91XY8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga11Q91XY8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhga11Q91XY8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga11Q91XY8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms