Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 Gm6623-201ENSMUST00000173570 544 ntBASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga4Q91XY4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhga4Q91XY4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhga4Q91XY4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhga4Q91XY4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhga4Q91XY4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Pcdhga4Q91XY4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhga4Q91XY4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Pcdhga4Q91XY4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhga4Q91XY4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhga4Q91XY4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Gm17808-201ENSMUST00000200859 894 ntBASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Gm45328-201ENSMUST00000210942 917 ntBASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga4Q91XY4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16■□□□□ 0.15
Pcdhga4Q91XY4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga4Q91XY4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdhga4Q91XY4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga4Q91XY4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms