Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga9Q91XX9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhga9Q91XX9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Gm7153-201ENSMUST00000117092 455 ntBASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Gm10052-201ENSMUST00000168019 960 ntBASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Gm7729-201ENSMUST00000050143 801 ntBASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga9Q91XX9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhga9Q91XX9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Gm44430-201ENSMUST00000203376 995 ntBASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga9Q91XX9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms