Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Gm29707-201ENSMUST00000196325 491 ntBASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb4Q91XX6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb4Q91XX6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Gm22697-201ENSMUST00000175194 63 ntBASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Gm9987-201ENSMUST00000069768 567 ntBASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb4Q91XX6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhgb4Q91XX6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhgb4Q91XX6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Gm21559-201ENSMUST00000220638 855 ntBASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Gm8587-201ENSMUST00000076538 843 ntBASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb4Q91XX6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb4Q91XX6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms