Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdhgc3Q91XX1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Gm13158-201ENSMUST00000122007 736 ntBASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Gm24841-201ENSMUST00000158676 357 ntBASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Gm18666-201ENSMUST00000190039 958 ntBASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Gm25007-201ENSMUST00000083808 133 ntBASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 App-207ENSMUST00000227737 2827 ntBASIC15.39■□□□□ 0.05
Pcdhgc3Q91XX1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Gm44711-201ENSMUST00000205414 1264 ntBASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhgc3Q91XX1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgc3Q91XX1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Gm20760-201ENSMUST00000179197 648 ntBASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms