Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb17Q91VD8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb17Q91VD8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb17Q91VD8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb17Q91VD8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 AC102542.1-201ENSMUST00000225204 1138 ntBASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb17Q91VD8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Gm27357-201ENSMUST00000183754 135 ntBASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb17Q91VD8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb17Q91VD8 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb17Q91VD8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.84■□□□□ 0.29
Pcdhb17Q91VD8 Gm28923-201ENSMUST00000187755 322 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms