Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Gm12350-201ENSMUST00000121208 462 ntBASIC17.24■□□□□ 0.35
TraipQ8VIG6 Gm11780-201ENSMUST00000136880 516 ntBASIC17.24■□□□□ 0.35
TraipQ8VIG6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TraipQ8VIG6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TraipQ8VIG6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TraipQ8VIG6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TraipQ8VIG6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TraipQ8VIG6 Gm8097-201ENSMUST00000117903 829 ntBASIC17.23■□□□□ 0.35
TraipQ8VIG6 Gm13418-201ENSMUST00000119097 944 ntBASIC17.23■□□□□ 0.35
TraipQ8VIG6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TraipQ8VIG6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.23■□□□□ 0.35
TraipQ8VIG6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TraipQ8VIG6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TraipQ8VIG6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TraipQ8VIG6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TraipQ8VIG6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TraipQ8VIG6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TraipQ8VIG6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TraipQ8VIG6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TraipQ8VIG6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.22■□□□□ 0.35
TraipQ8VIG6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Gm13216-201ENSMUST00000117145 591 ntBASIC17.22■□□□□ 0.35
TraipQ8VIG6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.22■□□□□ 0.35
TraipQ8VIG6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TraipQ8VIG6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Gm6089-201ENSMUST00000197666 938 ntBASIC17.22■□□□□ 0.35
TraipQ8VIG6 AW822252-206ENSMUST00000208904 237 ntBASIC17.22■□□□□ 0.35
TraipQ8VIG6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TraipQ8VIG6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Mir5126-201ENSMUST00000175513 77 ntBASIC17.21■□□□□ 0.35
TraipQ8VIG6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.21■□□□□ 0.35
TraipQ8VIG6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.21■□□□□ 0.35
TraipQ8VIG6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TraipQ8VIG6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TraipQ8VIG6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TraipQ8VIG6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms