Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.82■□□□□ 0.28
Trim60Q8VI40 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Gm2274-201ENSMUST00000184539 609 ntBASIC16.81■□□□□ 0.28
Trim60Q8VI40 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim60Q8VI40 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.8■□□□□ 0.28
Trim60Q8VI40 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.8■□□□□ 0.28
Trim60Q8VI40 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Gm18421-201ENSMUST00000204122 625 ntBASIC16.8■□□□□ 0.28
Trim60Q8VI40 Gm7370-201ENSMUST00000219471 767 ntBASIC16.8■□□□□ 0.28
Trim60Q8VI40 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim60Q8VI40 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Gm36967-201ENSMUST00000193814 266 ntBASIC16.79■□□□□ 0.28
Trim60Q8VI40 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim60Q8VI40 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim60Q8VI40 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms