Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 Gm27646-201ENSMUST00000183989 110 ntBASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.92□□□□□ -0.18
Cspg4Q8VHY0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cspg4Q8VHY0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.91□□□□□ -0.18
Cspg4Q8VHY0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cspg4Q8VHY0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cspg4Q8VHY0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cspg4Q8VHY0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cspg4Q8VHY0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cspg4Q8VHY0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.91□□□□□ -0.18
Cspg4Q8VHY0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.91□□□□□ -0.18
Cspg4Q8VHY0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cspg4Q8VHY0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cspg4Q8VHY0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cspg4Q8VHY0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cspg4Q8VHY0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cspg4Q8VHY0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Gm44335-201ENSMUST00000196879 141 ntBASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Gm44297-201ENSMUST00000198304 141 ntBASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Gm44346-201ENSMUST00000198851 141 ntBASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Cspg4Q8VHY0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cspg4Q8VHY0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms