Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40bQ8VHP8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40bQ8VHP8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40bQ8VHP8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40bQ8VHP8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rab40bQ8VHP8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Rab40bQ8VHP8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Rab40bQ8VHP8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Gm15378-201ENSMUST00000121894 207 ntBASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40bQ8VHP8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40bQ8VHP8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.61□□□□□ -0.07
Rab40bQ8VHP8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40bQ8VHP8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40bQ8VHP8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rab40bQ8VHP8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40bQ8VHP8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40bQ8VHP8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40bQ8VHP8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40bQ8VHP8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40bQ8VHP8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rab40bQ8VHP8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40bQ8VHP8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40bQ8VHP8 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.61□□□□□ -0.07
Rab40bQ8VHP8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rab40bQ8VHP8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.61□□□□□ -0.07
Rab40bQ8VHP8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms