Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.4■□□□□ 0.22
Rpa1Q8VEE4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Gm29257-201ENSMUST00000186115 639 ntBASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpa1Q8VEE4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpa1Q8VEE4 Asic1-205ENSMUST00000228185 1818 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms