Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.25■□□□□ 0.35
Lmcd1Q8VEE1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lmcd1Q8VEE1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lmcd1Q8VEE1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.25■□□□□ 0.35
Lmcd1Q8VEE1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.25■□□□□ 0.35
Lmcd1Q8VEE1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.25■□□□□ 0.35
Lmcd1Q8VEE1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lmcd1Q8VEE1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lmcd1Q8VEE1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.25■□□□□ 0.35
Lmcd1Q8VEE1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.25■□□□□ 0.35
Lmcd1Q8VEE1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lmcd1Q8VEE1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Gm45167-201ENSMUST00000208007 322 ntBASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lmcd1Q8VEE1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Gm37153-201ENSMUST00000193637 231 ntBASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Gm45612-201ENSMUST00000211320 160 ntBASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Gm18622-201ENSMUST00000219361 595 ntBASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lmcd1Q8VEE1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lmcd1Q8VEE1 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Lmcd1Q8VEE1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lmcd1Q8VEE1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lmcd1Q8VEE1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lmcd1Q8VEE1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lmcd1Q8VEE1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Lmcd1Q8VEE1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.21■□□□□ 0.35
Lmcd1Q8VEE1 Gm23547-201ENSMUST00000158210 271 ntBASIC17.21■□□□□ 0.35
Lmcd1Q8VEE1 Gm4899-201ENSMUST00000178708 719 ntBASIC17.21■□□□□ 0.35
Lmcd1Q8VEE1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Lmcd1Q8VEE1 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.21■□□□□ 0.35
Lmcd1Q8VEE1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lmcd1Q8VEE1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lmcd1Q8VEE1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lmcd1Q8VEE1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Lmcd1Q8VEE1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms