Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Gm4459-201ENSMUST00000118750 468 ntBASIC17.28■□□□□ 0.36
Smg8Q8VE18 Gm13418-201ENSMUST00000119097 944 ntBASIC17.28■□□□□ 0.36
Smg8Q8VE18 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Gm25406-201ENSMUST00000157599 105 ntBASIC17.28■□□□□ 0.36
Smg8Q8VE18 Gm10060-201ENSMUST00000212002 111 ntBASIC17.28■□□□□ 0.36
Smg8Q8VE18 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.28■□□□□ 0.36
Smg8Q8VE18 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smg8Q8VE18 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smg8Q8VE18 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smg8Q8VE18 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smg8Q8VE18 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smg8Q8VE18 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smg8Q8VE18 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.27■□□□□ 0.36
Smg8Q8VE18 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smg8Q8VE18 Gm4535-201ENSMUST00000182274 558 ntBASIC17.27■□□□□ 0.36
Smg8Q8VE18 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.27■□□□□ 0.36
Smg8Q8VE18 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.27■□□□□ 0.36
Smg8Q8VE18 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smg8Q8VE18 Gm10355-201ENSMUST00000097146 517 ntBASIC17.27■□□□□ 0.36
Smg8Q8VE18 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smg8Q8VE18 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Smg8Q8VE18 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smg8Q8VE18 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smg8Q8VE18 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smg8Q8VE18 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg8Q8VE18 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Gm12497-201ENSMUST00000138778 237 ntBASIC17.26■□□□□ 0.35
Smg8Q8VE18 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Mir6404-201ENSMUST00000183699 94 ntBASIC17.26■□□□□ 0.35
Smg8Q8VE18 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smg8Q8VE18 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg8Q8VE18 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Gm25990-201ENSMUST00000102440 86 ntBASIC17.25■□□□□ 0.35
Smg8Q8VE18 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.25■□□□□ 0.35
Smg8Q8VE18 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.25■□□□□ 0.35
Smg8Q8VE18 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smg8Q8VE18 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.25■□□□□ 0.35
Smg8Q8VE18 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smg8Q8VE18 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smg8Q8VE18 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smg8Q8VE18 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smg8Q8VE18 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smg8Q8VE18 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smg8Q8VE18 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smg8Q8VE18 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smg8Q8VE18 Gm8097-201ENSMUST00000117903 829 ntBASIC17.24■□□□□ 0.35
Smg8Q8VE18 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms