Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Vps39Q8R5L3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps39Q8R5L3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps39Q8R5L3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.29■□□□□ 0.2
Vps39Q8R5L3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps39Q8R5L3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps39Q8R5L3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps39Q8R5L3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps39Q8R5L3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Vps39Q8R5L3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Vps39Q8R5L3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps39Q8R5L3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps39Q8R5L3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Gm26039-201ENSMUST00000158152 144 ntBASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Gm45058-201ENSMUST00000205810 766 ntBASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Gm18959-201ENSMUST00000208954 655 ntBASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.27■□□□□ 0.2
Vps39Q8R5L3 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Gm10566-201ENSMUST00000086739 996 ntBASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vps39Q8R5L3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Vps39Q8R5L3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.27■□□□□ 0.19
Vps39Q8R5L3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.27■□□□□ 0.19
Vps39Q8R5L3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps39Q8R5L3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps39Q8R5L3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps39Q8R5L3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps39Q8R5L3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps39Q8R5L3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps39Q8R5L3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps39Q8R5L3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps39Q8R5L3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps39Q8R5L3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps39Q8R5L3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms