Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Gm13216-201ENSMUST00000117145 591 ntBASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Gm44450-201ENSMUST00000199528 114 ntBASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3kbp1Q8R550 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.73■□□□□ 0.27
Sh3kbp1Q8R550 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sh3kbp1Q8R550 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Birc2-201ENSMUST00000054878 378 ntBASIC16.71■□□□□ 0.27
Sh3kbp1Q8R550 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms