Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tmc1Q8R4P5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.91■□□□□ 0.78
Tmc1Q8R4P5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Tmc1Q8R4P5 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tmc1Q8R4P5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Actl10-202ENSMUST00000226583 1501 ntBASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tmc1Q8R4P5 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Tmc1Q8R4P5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Tmc1Q8R4P5 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Tmc1Q8R4P5 Gm7638-201ENSMUST00000121348 967 ntBASIC19.89■□□□□ 0.77
Tmc1Q8R4P5 Gm7889-201ENSMUST00000185591 958 ntBASIC19.89■□□□□ 0.77
Tmc1Q8R4P5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tmc1Q8R4P5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Tmc1Q8R4P5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tmc1Q8R4P5 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tmc1Q8R4P5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tmc1Q8R4P5 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC19.89■□□□□ 0.77
Tmc1Q8R4P5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tmc1Q8R4P5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tmc1Q8R4P5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tmc1Q8R4P5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tmc1Q8R4P5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tmc1Q8R4P5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tmc1Q8R4P5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tmc1Q8R4P5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tmc1Q8R4P5 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.87■□□□□ 0.77
Tmc1Q8R4P5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Tmc1Q8R4P5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tmc1Q8R4P5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tmc1Q8R4P5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tmc1Q8R4P5 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.87■□□□□ 0.77
Tmc1Q8R4P5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tmc1Q8R4P5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.87■□□□□ 0.77
Tmc1Q8R4P5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.86■□□□□ 0.77
Tmc1Q8R4P5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms