Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim29Q8R2Q0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trim29Q8R2Q0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim29Q8R2Q0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim29Q8R2Q0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim29Q8R2Q0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim29Q8R2Q0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.58■□□□□ 0.56
Trim29Q8R2Q0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim29Q8R2Q0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim29Q8R2Q0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Gm9013-201ENSMUST00000132939 882 ntBASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim29Q8R2Q0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim29Q8R2Q0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim29Q8R2Q0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trim29Q8R2Q0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim29Q8R2Q0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.54■□□□□ 0.56
Trim29Q8R2Q0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms