Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Gm10175-201ENSMUST00000086013 645 ntBASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vopp1Q8R1C3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Gm11764-201ENSMUST00000120221 623 ntBASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vopp1Q8R1C3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vopp1Q8R1C3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vopp1Q8R1C3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vopp1Q8R1C3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vopp1Q8R1C3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vopp1Q8R1C3 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.13■□□□□ 0.33
Vopp1Q8R1C3 Gm25911-201ENSMUST00000157621 56 ntBASIC17.13■□□□□ 0.33
Vopp1Q8R1C3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Vopp1Q8R1C3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.13■□□□□ 0.33
Vopp1Q8R1C3 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.13■□□□□ 0.33
Vopp1Q8R1C3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vopp1Q8R1C3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vopp1Q8R1C3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vopp1Q8R1C3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vopp1Q8R1C3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms