Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Gm44430-201ENSMUST00000203376 995 ntBASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Gm7729-201ENSMUST00000050143 801 ntBASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Gm6623-201ENSMUST00000173570 544 ntBASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf7Q8R0S1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Gm6345-202ENSMUST00000180900 204 ntBASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atf7Q8R0S1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Gm13836-201ENSMUST00000121159 501 ntBASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Gm6659-201ENSMUST00000174752 547 ntBASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atf7Q8R0S1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atf7Q8R0S1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atf7Q8R0S1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms