Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx54Q8K4L0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx54Q8K4L0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC21.22■□□□□ 0.99
Ddx54Q8K4L0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC21.22■□□□□ 0.99
Ddx54Q8K4L0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx54Q8K4L0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC21.22■□□□□ 0.99
Ddx54Q8K4L0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx54Q8K4L0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx54Q8K4L0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx54Q8K4L0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx54Q8K4L0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC21.22■□□□□ 0.99
Ddx54Q8K4L0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ddx54Q8K4L0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx54Q8K4L0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ddx54Q8K4L0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx54Q8K4L0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx54Q8K4L0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx54Q8K4L0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx54Q8K4L0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx54Q8K4L0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Ddx54Q8K4L0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx54Q8K4L0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC21.21■□□□□ 0.99
Ddx54Q8K4L0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Ddx54Q8K4L0 Mir7036b-201ENSMUST00000184791 63 ntBASIC21.21■□□□□ 0.99
Ddx54Q8K4L0 AC117588.1-201ENSMUST00000228510 999 ntBASIC21.21■□□□□ 0.99
Ddx54Q8K4L0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC21.21■□□□□ 0.99
Ddx54Q8K4L0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx54Q8K4L0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx54Q8K4L0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx54Q8K4L0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx54Q8K4L0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ddx54Q8K4L0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx54Q8K4L0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.2■□□□□ 0.98
Ddx54Q8K4L0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx54Q8K4L0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx54Q8K4L0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx54Q8K4L0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx54Q8K4L0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx54Q8K4L0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Ddx54Q8K4L0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx54Q8K4L0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx54Q8K4L0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ddx54Q8K4L0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx54Q8K4L0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Ddx54Q8K4L0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx54Q8K4L0 Nrn1-204ENSMUST00000224323 1779 ntBASIC21.19■□□□□ 0.98
Ddx54Q8K4L0 Gm11185-201ENSMUST00000117732 1007 ntBASIC21.19■□□□□ 0.98
Ddx54Q8K4L0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Ddx54Q8K4L0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx54Q8K4L0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx54Q8K4L0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx54Q8K4L0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx54Q8K4L0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Gm12892-201ENSMUST00000117367 1146 ntBASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Gm12428-201ENSMUST00000119844 727 ntBASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Gm11745-201ENSMUST00000121669 448 ntBASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Gm23547-201ENSMUST00000158210 271 ntBASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx54Q8K4L0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx54Q8K4L0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.17■□□□□ 0.98
Ddx54Q8K4L0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx54Q8K4L0 Gm15427-201ENSMUST00000117288 531 ntBASIC21.17■□□□□ 0.98
Ddx54Q8K4L0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC21.17■□□□□ 0.98
Ddx54Q8K4L0 Gm43474-201ENSMUST00000196415 774 ntBASIC21.17■□□□□ 0.98
Ddx54Q8K4L0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC21.17■□□□□ 0.98
Ddx54Q8K4L0 Gm45747-201ENSMUST00000212203 999 ntBASIC21.17■□□□□ 0.98
Ddx54Q8K4L0 Gm7787-201ENSMUST00000216858 688 ntBASIC21.17■□□□□ 0.98
Ddx54Q8K4L0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx54Q8K4L0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx54Q8K4L0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Ddx54Q8K4L0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx54Q8K4L0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx54Q8K4L0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ddx54Q8K4L0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 Mir6977-201ENSMUST00000184960 64 ntBASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 Gm36967-201ENSMUST00000193814 266 ntBASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 Gm45612-201ENSMUST00000211320 160 ntBASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 AC140397.2-201ENSMUST00000224213 834 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms