Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Gm7889-201ENSMUST00000185591 958 ntBASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.23■□□□□ 0.67
Cchcr1Q8K2I2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cchcr1Q8K2I2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cchcr1Q8K2I2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Gm43799-201ENSMUST00000201845 579 ntBASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cchcr1Q8K2I2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms