Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Gm13186-201ENSMUST00000118031 316 ntBASIC17.6■□□□□ 0.41
Trim68Q8K243 Gm7862-201ENSMUST00000121461 292 ntBASIC17.6■□□□□ 0.41
Trim68Q8K243 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim68Q8K243 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim68Q8K243 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim68Q8K243 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim68Q8K243 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim68Q8K243 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim68Q8K243 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Trim68Q8K243 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Trim68Q8K243 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim68Q8K243 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim68Q8K243 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim68Q8K243 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim68Q8K243 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim68Q8K243 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim68Q8K243 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim68Q8K243 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim68Q8K243 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim68Q8K243 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trim68Q8K243 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim68Q8K243 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim68Q8K243 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim68Q8K243 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.59■□□□□ 0.41
Trim68Q8K243 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim68Q8K243 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim68Q8K243 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim68Q8K243 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim68Q8K243 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.59■□□□□ 0.41
Trim68Q8K243 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.59■□□□□ 0.41
Trim68Q8K243 Gm8000-201ENSMUST00000188378 592 ntBASIC17.59■□□□□ 0.41
Trim68Q8K243 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.59■□□□□ 0.41
Trim68Q8K243 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Trim68Q8K243 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim68Q8K243 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim68Q8K243 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim68Q8K243 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim68Q8K243 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim68Q8K243 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim68Q8K243 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim68Q8K243 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim68Q8K243 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim68Q8K243 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim68Q8K243 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim68Q8K243 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim68Q8K243 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim68Q8K243 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim68Q8K243 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim68Q8K243 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim68Q8K243 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim68Q8K243 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.58■□□□□ 0.4
Trim68Q8K243 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim68Q8K243 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.58■□□□□ 0.4
Trim68Q8K243 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim68Q8K243 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim68Q8K243 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim68Q8K243 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trim68Q8K243 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim68Q8K243 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim68Q8K243 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trim68Q8K243 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim68Q8K243 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.57■□□□□ 0.4
Trim68Q8K243 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Trim68Q8K243 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.57■□□□□ 0.4
Trim68Q8K243 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Gm27867-201ENSMUST00000184778 125 ntBASIC17.57■□□□□ 0.4
Trim68Q8K243 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.57■□□□□ 0.4
Trim68Q8K243 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim68Q8K243 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.57■□□□□ 0.4
Trim68Q8K243 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim68Q8K243 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim68Q8K243 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim68Q8K243 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim68Q8K243 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim68Q8K243 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim68Q8K243 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Trim68Q8K243 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim68Q8K243 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim68Q8K243 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim68Q8K243 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim68Q8K243 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim68Q8K243 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim68Q8K243 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms