Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgcs1Q8JZK9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hmgcs1Q8JZK9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Gm13559-201ENSMUST00000120476 863 ntBASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Gm18421-201ENSMUST00000204122 625 ntBASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.54■□□□□ 0.08
Hmgcs1Q8JZK9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hmgcs1Q8JZK9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.52■□□□□ 0.08
Hmgcs1Q8JZK9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmgcs1Q8JZK9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmgcs1Q8JZK9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmgcs1Q8JZK9 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.52■□□□□ 0.08
Hmgcs1Q8JZK9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmgcs1Q8JZK9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmgcs1Q8JZK9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.52■□□□□ 0.08
Hmgcs1Q8JZK9 Gm11336-201ENSMUST00000118168 334 ntBASIC15.52■□□□□ 0.08
Hmgcs1Q8JZK9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hmgcs1Q8JZK9 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.52■□□□□ 0.08
Hmgcs1Q8JZK9 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.52■□□□□ 0.08
Hmgcs1Q8JZK9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hmgcs1Q8JZK9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Hmgcs1Q8JZK9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Hmgcs1Q8JZK9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Hmgcs1Q8JZK9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.52■□□□□ 0.07
Hmgcs1Q8JZK9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Hmgcs1Q8JZK9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Hmgcs1Q8JZK9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.52■□□□□ 0.07
Hmgcs1Q8JZK9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmgcs1Q8JZK9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmgcs1Q8JZK9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hmgcs1Q8JZK9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hmgcs1Q8JZK9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hmgcs1Q8JZK9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hmgcs1Q8JZK9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hmgcs1Q8JZK9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms