Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Gm25990-201ENSMUST00000102440 86 ntBASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
Rab11fip3Q8CHD8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rab11fip3Q8CHD8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Gm13216-201ENSMUST00000117145 591 ntBASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab11fip3Q8CHD8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rab11fip3Q8CHD8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rab11fip3Q8CHD8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rab11fip3Q8CHD8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rab11fip3Q8CHD8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.93■□□□□ 0.94
Rab11fip3Q8CHD8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rab11fip3Q8CHD8 Gm8097-201ENSMUST00000117903 829 ntBASIC20.93■□□□□ 0.94
Rab11fip3Q8CHD8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.93■□□□□ 0.94
Rab11fip3Q8CHD8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.93■□□□□ 0.94
Rab11fip3Q8CHD8 Gm7230-201ENSMUST00000173026 815 ntBASIC20.93■□□□□ 0.94
Rab11fip3Q8CHD8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rab11fip3Q8CHD8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rab11fip3Q8CHD8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rab11fip3Q8CHD8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rab11fip3Q8CHD8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rab11fip3Q8CHD8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 Gm13418-201ENSMUST00000119097 944 ntBASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab11fip3Q8CHD8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms