Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShfQ8CG80 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.51□□□□□ -0.09
ShfQ8CG80 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.51□□□□□ -0.09
ShfQ8CG80 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
ShfQ8CG80 Gm11336-201ENSMUST00000118168 334 ntBASIC14.51□□□□□ -0.09
ShfQ8CG80 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Gm2274-201ENSMUST00000184539 609 ntBASIC14.51□□□□□ -0.09
ShfQ8CG80 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ShfQ8CG80 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ShfQ8CG80 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.51□□□□□ -0.09
ShfQ8CG80 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.51□□□□□ -0.09
ShfQ8CG80 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ShfQ8CG80 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ShfQ8CG80 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ShfQ8CG80 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ShfQ8CG80 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
ShfQ8CG80 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ShfQ8CG80 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShfQ8CG80 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShfQ8CG80 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ShfQ8CG80 Gm7213-201ENSMUST00000215977 950 ntBASIC14.5□□□□□ -0.09
ShfQ8CG80 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ShfQ8CG80 Gm10812-201ENSMUST00000099864 546 ntBASIC14.5□□□□□ -0.09
ShfQ8CG80 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ShfQ8CG80 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShfQ8CG80 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
ShfQ8CG80 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ShfQ8CG80 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShfQ8CG80 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShfQ8CG80 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShfQ8CG80 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShfQ8CG80 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ShfQ8CG80 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ShfQ8CG80 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ShfQ8CG80 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ShfQ8CG80 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ShfQ8CG80 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
ShfQ8CG80 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ShfQ8CG80 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.49□□□□□ -0.09
ShfQ8CG80 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.49□□□□□ -0.09
ShfQ8CG80 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.49□□□□□ -0.09
ShfQ8CG80 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.49□□□□□ -0.09
ShfQ8CG80 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
ShfQ8CG80 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ShfQ8CG80 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShfQ8CG80 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
ShfQ8CG80 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShfQ8CG80 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShfQ8CG80 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShfQ8CG80 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShfQ8CG80 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ShfQ8CG80 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShfQ8CG80 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.48□□□□□ -0.09
ShfQ8CG80 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.48□□□□□ -0.09
ShfQ8CG80 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShfQ8CG80 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShfQ8CG80 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShfQ8CG80 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ShfQ8CG80 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ShfQ8CG80 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShfQ8CG80 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ShfQ8CG80 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms