Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smc5Q8CG46 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.11■□□□□ 0.81
Smc5Q8CG46 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc5Q8CG46 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc5Q8CG46 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.11■□□□□ 0.81
Smc5Q8CG46 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smc5Q8CG46 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc5Q8CG46 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc5Q8CG46 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Smc5Q8CG46 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smc5Q8CG46 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc5Q8CG46 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc5Q8CG46 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smc5Q8CG46 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc5Q8CG46 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smc5Q8CG46 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc5Q8CG46 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc5Q8CG46 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc5Q8CG46 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc5Q8CG46 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc5Q8CG46 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smc5Q8CG46 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc5Q8CG46 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Smc5Q8CG46 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc5Q8CG46 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc5Q8CG46 Gm13474-201ENSMUST00000122466 815 ntBASIC20.09■□□□□ 0.81
Smc5Q8CG46 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Smc5Q8CG46 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.09■□□□□ 0.81
Smc5Q8CG46 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.09■□□□□ 0.81
Smc5Q8CG46 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc5Q8CG46 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc5Q8CG46 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Smc5Q8CG46 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Smc5Q8CG46 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
Smc5Q8CG46 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Smc5Q8CG46 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc5Q8CG46 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc5Q8CG46 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC20.08■□□□□ 0.81
Smc5Q8CG46 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc5Q8CG46 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc5Q8CG46 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc5Q8CG46 Gm2274-201ENSMUST00000184539 609 ntBASIC20.08■□□□□ 0.81
Smc5Q8CG46 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.08■□□□□ 0.81
Smc5Q8CG46 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.08■□□□□ 0.81
Smc5Q8CG46 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Smc5Q8CG46 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc5Q8CG46 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc5Q8CG46 Gm5417-201ENSMUST00000079706 384 ntBASIC20.08■□□□□ 0.81
Smc5Q8CG46 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Smc5Q8CG46 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc5Q8CG46 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc5Q8CG46 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.8
Smc5Q8CG46 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Smc5Q8CG46 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc5Q8CG46 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Smc5Q8CG46 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Smc5Q8CG46 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC20.07■□□□□ 0.8
Smc5Q8CG46 Gm27528-202ENSMUST00000222916 2012 ntBASIC20.07■□□□□ 0.8
Smc5Q8CG46 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc5Q8CG46 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc5Q8CG46 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Smc5Q8CG46 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smc5Q8CG46 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc5Q8CG46 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc5Q8CG46 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Smc5Q8CG46 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc5Q8CG46 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc5Q8CG46 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc5Q8CG46 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc5Q8CG46 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smc5Q8CG46 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms