Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc28aQ8CEI3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc28aQ8CEI3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Ccdc28aQ8CEI3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc28aQ8CEI3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc28aQ8CEI3 Odf3b-204ENSMUST00000227834 930 ntBASIC17.16■□□□□ 0.34
Ccdc28aQ8CEI3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc28aQ8CEI3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc28aQ8CEI3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc28aQ8CEI3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc28aQ8CEI3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc28aQ8CEI3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc28aQ8CEI3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc28aQ8CEI3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Gm18115-201ENSMUST00000221209 621 ntBASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Phf7-203ENSMUST00000226565 1971 ntBASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc28aQ8CEI3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc28aQ8CEI3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc28aQ8CEI3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc28aQ8CEI3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc28aQ8CEI3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms