Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim52Q8CDV4 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.01■□□□□ 0.79
Trim52Q8CDV4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trim52Q8CDV4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trim52Q8CDV4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim52Q8CDV4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim52Q8CDV4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim52Q8CDV4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim52Q8CDV4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Trim52Q8CDV4 Gm15467-201ENSMUST00000120582 445 ntBASIC20■□□□□ 0.79
Trim52Q8CDV4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim52Q8CDV4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20■□□□□ 0.79
Trim52Q8CDV4 Gm5682-201ENSMUST00000173402 505 ntBASIC20■□□□□ 0.79
Trim52Q8CDV4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC20■□□□□ 0.79
Trim52Q8CDV4 Gm5264-201ENSMUST00000190584 848 ntBASIC20■□□□□ 0.79
Trim52Q8CDV4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim52Q8CDV4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim52Q8CDV4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim52Q8CDV4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim52Q8CDV4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trim52Q8CDV4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trim52Q8CDV4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim52Q8CDV4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trim52Q8CDV4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim52Q8CDV4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim52Q8CDV4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Trim52Q8CDV4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim52Q8CDV4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim52Q8CDV4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Trim52Q8CDV4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim52Q8CDV4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim52Q8CDV4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trim52Q8CDV4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.99■□□□□ 0.79
Trim52Q8CDV4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Trim52Q8CDV4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trim52Q8CDV4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Trim52Q8CDV4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim52Q8CDV4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.99■□□□□ 0.79
Trim52Q8CDV4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.99■□□□□ 0.79
Trim52Q8CDV4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim52Q8CDV4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim52Q8CDV4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Trim52Q8CDV4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim52Q8CDV4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim52Q8CDV4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Gm11764-201ENSMUST00000120221 623 ntBASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim52Q8CDV4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim52Q8CDV4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim52Q8CDV4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim52Q8CDV4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim52Q8CDV4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim52Q8CDV4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim52Q8CDV4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim52Q8CDV4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim52Q8CDV4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Trim52Q8CDV4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim52Q8CDV4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim52Q8CDV4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim52Q8CDV4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim52Q8CDV4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim52Q8CDV4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim52Q8CDV4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Trim52Q8CDV4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trim52Q8CDV4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim52Q8CDV4 Gm11594-201ENSMUST00000122313 162 ntBASIC19.96■□□□□ 0.79
Trim52Q8CDV4 Gm9727-201ENSMUST00000161387 555 ntBASIC19.96■□□□□ 0.79
Trim52Q8CDV4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim52Q8CDV4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim52Q8CDV4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim52Q8CDV4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim52Q8CDV4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trim52Q8CDV4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trim52Q8CDV4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim52Q8CDV4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.96■□□□□ 0.79
Trim52Q8CDV4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim52Q8CDV4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim52Q8CDV4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.95■□□□□ 0.79
Trim52Q8CDV4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim52Q8CDV4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms