Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Gm15565-201ENSMUST00000118890 427 ntBASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc38Q8CDN8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc38Q8CDN8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Gm10252-201ENSMUST00000209541 832 ntBASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc38Q8CDN8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc38Q8CDN8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Ccdc38Q8CDN8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc38Q8CDN8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc38Q8CDN8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms