Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Gm8520-201ENSMUST00000186517 868 ntBASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx6Q8C7R7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx6Q8C7R7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rfx6Q8C7R7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx6Q8C7R7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rfx6Q8C7R7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx6Q8C7R7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx6Q8C7R7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.52■□□□□ 0.24
Rfx6Q8C7R7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.52■□□□□ 0.24
Rfx6Q8C7R7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx6Q8C7R7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx6Q8C7R7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx6Q8C7R7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx6Q8C7R7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rfx6Q8C7R7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rfx6Q8C7R7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rfx6Q8C7R7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rfx6Q8C7R7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx6Q8C7R7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Gm21814-202ENSMUST00000203277 873 ntBASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx6Q8C7R7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx6Q8C7R7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx6Q8C7R7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx6Q8C7R7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.49■□□□□ 0.23
Rfx6Q8C7R7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx6Q8C7R7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx6Q8C7R7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx6Q8C7R7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx6Q8C7R7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx6Q8C7R7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx6Q8C7R7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.49■□□□□ 0.23
Rfx6Q8C7R7 Gm18115-201ENSMUST00000221209 621 ntBASIC16.49■□□□□ 0.23
Rfx6Q8C7R7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Rfx6Q8C7R7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfx6Q8C7R7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms