Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm21362-201ENSMUST00000194272 928 ntBASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc60Q8C4J0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc60Q8C4J0 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.73■□□□□ 0.91
Ccdc60Q8C4J0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc60Q8C4J0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc60Q8C4J0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc60Q8C4J0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc60Q8C4J0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc60Q8C4J0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc60Q8C4J0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc60Q8C4J0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc60Q8C4J0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc60Q8C4J0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc60Q8C4J0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc60Q8C4J0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc60Q8C4J0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc60Q8C4J0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc60Q8C4J0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc60Q8C4J0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc60Q8C4J0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc60Q8C4J0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc60Q8C4J0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc60Q8C4J0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc60Q8C4J0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc60Q8C4J0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc60Q8C4J0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc60Q8C4J0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc60Q8C4J0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc60Q8C4J0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc60Q8C4J0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc60Q8C4J0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc60Q8C4J0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc60Q8C4J0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc60Q8C4J0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc60Q8C4J0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc60Q8C4J0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms