Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rft1Q8C3B8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.52□□□□□ -0.08
Rft1Q8C3B8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rft1Q8C3B8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Rft1Q8C3B8 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.52□□□□□ -0.08
Rft1Q8C3B8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rft1Q8C3B8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rft1Q8C3B8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rft1Q8C3B8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rft1Q8C3B8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.52□□□□□ -0.08
Rft1Q8C3B8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.52□□□□□ -0.09
Rft1Q8C3B8 Gm43799-201ENSMUST00000201845 579 ntBASIC14.52□□□□□ -0.09
Rft1Q8C3B8 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.52□□□□□ -0.09
Rft1Q8C3B8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rft1Q8C3B8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rft1Q8C3B8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rft1Q8C3B8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rft1Q8C3B8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rft1Q8C3B8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rft1Q8C3B8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rft1Q8C3B8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Gm27463-201ENSMUST00000183569 57 ntBASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rft1Q8C3B8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.5□□□□□ -0.09
Rft1Q8C3B8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rft1Q8C3B8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rft1Q8C3B8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rft1Q8C3B8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rft1Q8C3B8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms