Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3dQ8BX13 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3dQ8BX13 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3dQ8BX13 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ube3dQ8BX13 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3dQ8BX13 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Gm29518-201ENSMUST00000190858 372 ntBASIC14.43□□□□□ -0.1
Ube3dQ8BX13 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.43□□□□□ -0.1
Ube3dQ8BX13 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Gm17808-201ENSMUST00000200859 894 ntBASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube3dQ8BX13 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Gm27000-201ENSMUST00000182943 842 ntBASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ube3dQ8BX13 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms