Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdk5rap1Q8BTW8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Cdk5rap1Q8BTW8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.06
Cdk5rap1Q8BTW8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Mzt1-203ENSMUST00000227948 952 ntBASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdk5rap1Q8BTW8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdk5rap1Q8BTW8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Rps4l-201ENSMUST00000071745 943 ntBASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdk5rap1Q8BTW8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdk5rap1Q8BTW8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms